Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

MM Myeloma Zhan Cluster Number 3 (98 genes) This page contains all miRNA mediated regulation and functional enrichment for MM Myeloma Zhan cluster number 3. Information about myeloma can be found on Wikipedia, and further information about the "MM Myeloma Zhan" dataset can be found in Zhan et al., 2002. Inferred miRNA Mediated Regulation Weeder-miRvestigator PITA TargetScan zzz999 hsa-mir-590-3p hsa-mir-548c-3p Gene Ontology Enrichment GO ID GO Term Annotated Genes in Cluster GO:0005975 carbohydrate metabolic process 16 GO:0007264 small GTPase mediated signal transduction 18 GO:0008104 protein localization 23 GO:0015031 protein transport 21 GO:0033036 macromolecule localization 24 GO:0044262 cellular carbohydrate metabolic process 15 GO:0045184 establishment of protein localization 21 GO:0046907 intracellular transport 18 GO:0048011 nerve growth factor receptor signaling pathway 10 Overlap Between miRNA Target Genes and Enriched Gene Ontology Annotations miRNA Method GO ID GO Term Overlap GO Annotated Genes Cluster Size miRNA Targets Genes P-Value hsa-mir-548c-3p TargetScan GO:0005975 carbohydrate metabolic process 13 16 98 74 0.1860696 hsa-mir-590-3p PITA GO:0005975 carbohydrate metabolic process 5 16 98 35 0.5410206 hsa-mir-548c-3p TargetScan GO:0007264 small GTPase mediated signal transduction 12 18 98 74 0.7517287 hsa-mir-590-3p PITA GO:0007264 small GTPase mediated signal transduction 6 18 98 35 0.4778295 hsa-mir-548c-3p TargetScan GO:0008104 protein localization 19 23 98 74 0.1160656 hsa-mir-590-3p PITA GO:0008104 protein localization 9 23 98 35 0.2590622 hsa-mir-548c-3p TargetScan GO:0015031 protein transport 17 21 98 74 0.1745567 hsa-mir-590-3p PITA GO:0015031 protein transport 8 21 98 35 0.3004062 hsa-mir-548c-3p TargetScan GO:0033036 macromolecule localization 20 24 98 74 0.09335571 hsa-mir-590-3p PITA GO:0033036 macromolecule localization 9 24 98 35 0.3213244 hsa-mir-548c-3p TargetScan GO:0044262 cellular carbohydrate metabolic process 12 15 98 74 0.2279735 hsa-mir-590-3p PITA GO:0044262 cellular carbohydrate metabolic process 4 15 98 35 0.6860228 hsa-mir-548c-3p TargetScan GO:0045184 establishment of protein localization 17 21 98 74 0.1745567 hsa-mir-590-3p PITA GO:0045184 establishment of protein localization 8 21 98 35 0.3004062 hsa-mir-548c-3p TargetScan GO:0046907 intracellular transport 15 18 98 74 0.1205359 hsa-mir-590-3p PITA GO:0046907 intracellular transport 7 18 98 35 0.2765524 hsa-mir-548c-3p TargetScan GO:0048011 nerve growth factor receptor signaling pathway 8 10 98 74 0.2406882 hsa-mir-590-3p PITA GO:0048011 nerve growth factor receptor signaling pathway 3 10 98 35 0.5086468

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.